Open dataset · MR

MedSeg Lateral Ventricles (MRI)

Lateral ventricles segmented on 50 brain MRI scans, each from a different OpenNeuro source.

The sample cases below open read-only in the MedSeg editor - no account needed. Open the full dataset to copy all 50 cases into your workspace, run AI models, and segment.

MR 50 cases CC0-1.0 Reference masks
MedSeg Lateral Ventricles (MRI) - example case rendered in the MedSeg editor
Example case with its reference segmentation - straight from the catalog, rendered by MedSeg.

Browse sample cases

These cases open instantly in the browser-based editor - scroll the slices, inspect the reference masks, window the image. No account needed.

Open the full dataset in MedSeg → All 50 cases - copy into your workspace to run AI and segment.

About this dataset

The lateral ventricles segmented by the MedSeg team on 50 brain MRI scans, each drawn from a different OpenNeuro dataset to maximize heterogeneity of scanner, sequence and population.

FactValue
Cases50
Series50
Size0.7 GB
ModalityMR
Reference masksYes
LicenseCC0-1.0
PublisherMedSeg
Version-

What you can do with it in MedSeg

Copied cases behave like normal project series - the public image bytes are linked, not duplicated, so copies are instant and take no extra storage.

  1. Copy cases into a project.
    Filter, multi-select, copy - reference masks come along if you want them.
  2. Run AI segmentation.
    TotalSegmentator, MRSegmentator, nnInteractive 3D clicks/scribbles, or text-prompted VoxTell.
  3. Edit and measure.
    Brush, lasso, fill, oblique planes, volumes in ml - in the browser.
  4. Train your own nnU-Net.
    Correct masks on a handful of cases and train a custom model on hosted GPUs.

License: CC0-1.0

Open data still carries obligations - attribution at minimum. Check the license terms before publishing work built on this dataset. MedSeg is a research tool, not a medical device.

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